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The Layout Editor is an incredibly powerful
tool in the creation of both analysis and publication graphics.
It is designed to create "layouts" which can contain one
or more graphical objects, which include rectangles, lines, text and
graphs. It works like a page layout program, but the graphs
are live and will recalculate with any change in the data or gating.
The page describing the Layout Editor controls
explains the tool palette, commands and options associated with the
editor. The page describing layout elements
also contains useful information about the myriad of features within
FlowJo's presentation capabilities. Using
the Layout Editor, you can generate graphical reports that can do
any of the following:
- Show multiple different graphs from the same
gated subset
- Create a report
mixing graphs from different subsets or samples
- Overlay
dot plots, histograms, or Kinetics analyses
- Mix statistics,
text items, boxes, lines, and other items with your graphs
- Generate batch reports with complex layouts created
for each sample in the workspace
Layouts are "live", in that the graphic
window is updated whenever any of the gates or statistics change
(because you moved a gate, or change an analysis, etc.). You
never have to worry about whether to update the reports or not;
FlowJo will do so automatically!
The Layout Editor knows how to iterate,
that is, to create the same layout for many different samples.
It can iterate over every sample in a group, or via "Panels"
where graphs from different samples are combined in a single layout.
Iterated layouts, or stacks are displayed in a special
"stack viewer"
window. You may view stacks, either as Tiled
Frames, where the frames are laid out
on a two dimensional grid, or as Animated
Frames, where time is used as the third
analytical dimension, and the frames are played as a movie.
The stack viewer can save, print or export the frames, as well as
save them in HTML
for export to the web.
Because a layout contains many different graphs
and therefore can take a long time to generate, FlowJo supports
placeholders to make the editor more responsive while creating
the layouts.
The best explanation is to walk through a simple
example of using a layout to check the applicability of a gate
across a group of samples. A more
involved example is taken from the FlowJo
tutorial.
See Also: Workspace,
Table Editor,
Groups |