Note: This version of FlowJo is compatible with FlowJo Enterprise v2.0 or the newly released FlowJo Enterprise 2.1. Be sure your version of FlowJo Enterprise is new enough before installing this version of FlowJo.
Sierra, macOS 10.12, is now available as a free upgrade. This new version of the Mac OS supports Java 7 and higher. This update removes Java 6, which is required by FlowJo versions 10.2 and older. We are working on a new version of FlowJo™ that will use the current version of Java.
FlowJo can now use plugins that can perform a variety of functions, including the creation of populations, creation of derived parameters, and actions when opening or saving a workspace.
The open plugin architecture of 10.2 allows access to cutting edge tools that can be integrated into your current analysis workflows, and we will be releasing developer documentation so any tool can be integrated into FlowJo. FlowJo 10.2 includes a set of tools for discovery including downsampling, tSNE and CellOntology. You'll find these as 'plugins' in the populations band -- each offers one-click access to powerful tools to reduce any number of parameters to two and to query a database to name unknown populations.
•Increased the number of parameters that FlowJo can analyze to 1000
•Added a field to allow specification of R's path in prefs (Diagnostic Panel)
•Better interface for Licensing Preferences Panel in the case where a computer has many hardware addresses.
•Updated EULA to raise the awareness of the fact that you may not install FlowJo on a VM.
•Unchecked 'Display other X/Y parameters than in parent plot' as default in Gates Preferences
•Removed the option to downsample when concatenating files. (Downsample before you concatenate if desired.)
Full Release Notes